STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLBD1Phospholipase B-like; Putative phospholipase. (555 aa)    
Predicted Functional Partners:
SPHKAP
SPHK1 interactor, AKAP domain containing.
      
 0.845
TRIM46
Tripartite motif containing 46.
      
 0.794
PPAT
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
      
 0.770
TEF
TEF transcription factor, PAR bZIP family member.
   
  
 0.700
NPTX1
Neuronal pentraxin 1.
      
 0.678
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
      
 0.671
PDE6H
Phosphodiesterase 6H.
   
  
 0.664
PLAGL1
PLAG1 like zinc finger 1.
      
 0.634
MTMR2
Myotubularin related protein 2.
      
 0.613
VRK1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
      
 0.602
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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