STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGCUncharacterized protein. (117 aa)    
Predicted Functional Partners:
GUCA2A
Guanylate cyclase activator 2A.
   
  
 0.630
ATP4B
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
   
 
 0.605
LOC100059452
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
  
 0.568
LOC100062179
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
  
 0.568
LOC100059308
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
  
 0.568
LOC100059232
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
  
 0.568
LOC100059532
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
  
 0.568
CBLIF
Cobalamin binding intrinsic factor.
   
  
 0.553
CNGA3
Cyclic nucleotide gated channel subunit alpha 3.
      
 0.511
LMCD1
LIM and cysteine rich domains 1.
      
 0.481
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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