STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHA1Pleckstrin homology domain containing A1. (438 aa)    
Predicted Functional Partners:
PTPN13
Protein tyrosine phosphatase non-receptor type 13.
    
  0.884
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.837
HTRA1
HtrA serine peptidase 1.
 
    
 0.742
KDM6B
Lysine demethylase 6B.
    
 0.623
KDM6A
Lysine demethylase 6A.
    
 0.623
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.572
H2AZ2
Histone H2A; Belongs to the histone H2A family.
   
 0.517
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 0.517
GLYR1
Glyoxylate reductase 1 homolog.
    
   0.493
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.486
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.