STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMED9Transmembrane p24 trafficking protein 9. (235 aa)    
Predicted Functional Partners:
TMED10
Transmembrane p24 trafficking protein 10.
   
0.894
TMED2
Transmembrane p24 trafficking protein 2.
   
0.886
PMS1
PMS1 homolog 1, mismatch repair system component.
      
 0.812
HIBCH
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.768
B4GALT7
Beta-1,4-galactosyltransferase 7.
 
 
  
 0.763
TMED3
GOLD domain-containing protein; Belongs to the EMP24/GP25L family.
   
0.732
ORMDL1
ORM1-like protein; Negative regulator of sphingolipid synthesis.
   
 
 0.728
DBN1
Drebrin 1.
      
 0.724
SURF4
Surfeit 4.
   
 0.690
TMED7
GOLD domain-containing protein.
   
0.644
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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