STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC4Armadillo repeat containing 4. (1071 aa)    
Predicted Functional Partners:
RGL3
Ral guanine nucleotide dissociation stimulator like 3.
   
 
 0.963
CCDC114
Coiled-coil domain containing 114.
   
 
 0.941
EFCAB1
EF-hand calcium binding domain 1.
  
 
 0.938
PACRG
Parkin coregulated.
   
 
 0.903
CNP
2',3'-cyclic nucleotide 3' phosphodiesterase.
  
 
 0.900
CCDC63
Coiled-coil domain containing 63.
   
 
 0.885
EFHC1
EF-hand domain containing 1.
   
 
 0.880
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.873
LOC100067446
Uncharacterized protein.
   
 
 0.867
TEKT1
Tektin 1.
   
 
 0.866
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.