STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRFBP1Serum response factor binding protein 1. (428 aa)    
Predicted Functional Partners:
POLRMT
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
 0.936
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
  0.891
PWP2
Uncharacterized protein.
   
 0.886
WDR3
WD repeat domain 3.
   
  0.877
WDR36
WD repeat domain 36.
   
  0.876
BYSL
Bystin like.
   
 
 0.864
UTP18
UTP18 small subunit processome component.
   
  0.854
BMS1
BMS1 ribosome biogenesis factor.
   
 0.852
UTP6
UTP6 small subunit processome component.
   
  0.851
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.845
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.