STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC3Transmembrane channel-like protein. (1101 aa)    
Predicted Functional Partners:
CIB2
Calcium and integrin binding family member 2.
    
 0.766
CIB1
Calcium and integrin binding 1.
    
 0.702
CIB3
Calcium and integrin binding family member 3.
    
 0.702
TMIE
Transmembrane inner ear.
   
 
 0.567
UTS2B
Urotensin 2B.
     
 0.488
KCNG1
Potassium voltage-gated channel modifier subfamily G member 1; Belongs to the potassium channel family.
    
 
 0.488
GTF2I
General transcription factor IIi.
    
 
 0.470
LHFPL3
LHFPL tetraspan subfamily member 3.
   
 
 0.455
LHFPL4
LHFPL tetraspan subfamily member 4.
   
 
 0.441
LHFPL5
LHFPL tetraspan subfamily member 5.
   
 
 0.441
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.