STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBX2Ladybird homeobox 2. (192 aa)    
Predicted Functional Partners:
HBS1L
HBS1 like translational GTPase.
      
 0.561
TMCC2
Transmembrane and coiled-coil domain family 2.
      
 0.481
GP9
Glycoprotein IX platelet.
      
 0.480
GP1BB
Glycoprotein Ib platelet subunit beta.
      
 0.479
PEAR1
Platelet endothelial aggregation receptor 1.
      
 0.472
LDLRAD4
Low density lipoprotein receptor class A domain containing 4.
      
 0.432
GATA1
GATA binding protein 1.
   
 
 0.420
FAM83B
Family with sequence similarity 83 member B.
      
 0.416
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.