STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C21H5orf49Chromosome 21 C5orf49 homolog. (147 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.959
C27H4orf47
Chromosome 27 C4orf47 homolog.
  
  
 0.864
IFT57
Intraflagellar transport 57.
      
 0.836
EFCAB1
EF-hand calcium binding domain 1.
   
 
 0.819
ARMC3
Armadillo repeat containing 3.
   
  
 0.742
ENKUR
Enkurin, TRPC channel interacting protein.
   
 
 0.737
CFAP161
Cilia and flagella associated protein 161.
   
 
 0.630
SPACA9
Sperm acrosome associated 9.
   
 
 0.621
NME7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
   
 
 0.594
C5H1orf194
Chromosome 5 C1orf194 homolog.
   
   0.588
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.