STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FARP1FERM, ARH/RhoGEF and pleckstrin domain protein 1. (1046 aa)    
Predicted Functional Partners:
ANGPTL8
Angiopoietin like 8.
      
 0.697
PLXNA4
Plexin A4.
     
 0.687
ZNF280D
Zinc finger protein 280D.
      
 0.655
PIP5K1C
Phosphatidylinositol-4-phosphate 5-kinase type 1 gamma.
     
 0.655
ARAP3
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3.
      
 0.632
PRTG
Protogenin.
     
 0.594
SBF1
SET binding factor 1.
      
 0.594
SLC33A1
Solute carrier family 33 member 1.
      
 0.581
CLEC16A
C-type lectin domain containing 16A.
   
  
 0.572
TPPP3
Tubulin polymerization promoting protein family member 3.
      
 0.567
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.