STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYCBPUncharacterized protein. (56 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.835
POLR3E
RNA polymerase III subunit E.
   
  
 0.766
AKAP10
A-kinase anchoring protein 10.
      
 0.739
ATF7IP
Activating transcription factor 7 interacting protein.
    
 
 0.687
PAIP1
Poly(A) binding protein interacting protein 1.
   
  
 0.673
MTREX
Mtr4 exosome RNA helicase.
   
  
 0.658
MYCBPAP
MYCBP associated protein.
    
 
 0.649
WDR90
WD repeat domain 90.
   
   0.612
CCDC189
Coiled-coil domain containing 189.
    
 
 0.590
ARAP1
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1.
      
 0.589
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.