STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CATSPERZCatsper channel auxiliary subunit zeta. (198 aa)    
Predicted Functional Partners:
EFCAB9
EF-hand calcium binding domain 9.
    
 0.810
CATSPER1
Cation channel sperm associated 1.
    
 0.766
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 0.763
CATSPERE
Catsper channel auxiliary subunit epsilon.
    
 0.762
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
    
 0.761
CATSPER2
Cation channel sperm associated 2.
    
 0.755
CATSPER3
Cation channel sperm associated 3.
    
 0.749
CATSPER4
Cation channel sperm associated 4.
    
 0.746
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
    
 0.720
TMEM249
Transmembrane protein 249.
    
  0.677
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.