STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH2AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase. (260 aa)    
Predicted Functional Partners:
ALKBH1
AlkB homolog 1, histone H2A dioxygenase.
      
 0.840
IARS2
Isoleucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.840
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
   
  
 0.733
YARS1
Tyrosine--tRNA ligase.
  
  
 0.722
AARS2
Alanyl-tRNA synthetase 2, mitochondrial; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.722
RPL8
Ribosomal protein L8.
   
 
 0.721
METTL4
Methyltransferase like 4; Belongs to the MT-A70-like family.
   
  
 0.719
MUTYH
MutY DNA glycosylase.
      
 0.711
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.707
ALKBH8
AlkB homolog 8, tRNA methyltransferase.
   
  
 0.703
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.