STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH20Cadherin 20; Cadherins are calcium-dependent cell adhesion proteins. (801 aa)    
Predicted Functional Partners:
NKAIN2
Sodium/potassium transporting ATPase interacting 2.
   
  
 0.803
FRMD5
FERM domain containing 5.
    
 
 0.766
LURAP1L
Leucine rich adaptor protein 1 like.
      
 0.742
CLDND1
Claudin domain containing 1.
      
 0.740
CTNNA1
Catenin alpha 1.
    
 0.693
CTNNA2
Catenin alpha 2.
    
 0.693
CTNNB1
Beta catenin 1.
    
 0.690
JUP
Junction plakoglobin.
    
 0.675
LRRTM3
Leucine rich repeat transmembrane neuronal 3.
   
 
 0.660
C1QTNF3
C1q domain-containing protein.
   
 0.653
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.