STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT3Synaptotagmin 3. (591 aa)    
Predicted Functional Partners:
EMC10
ER membrane protein complex subunit 10.
      
 0.954
KLK15
Kallikrein related peptidase 15; Belongs to the peptidase S1 family.
      
 0.907
SHANK1
SH3 and multiple ankyrin repeat domains 1.
   
 
 0.791
PCDHB3
Protocadherin beta 3.
   
 
 0.757
LRRC4B
Leucine rich repeat containing 4B.
   
  
 0.699
RAB3A
RAB3A, member RAS oncogene family.
   
 0.625
ETFRF1
Electron transfer flavoprotein regulatory factor 1; Belongs to the complex I LYR family.
      
 0.622
ETNPPL
Ethanolamine-phosphate phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      
 0.608
ITSN2
Intersectin 2.
     
 0.596
STXBP1
Syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.583
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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