STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VEZF1Vascular endothelial zinc finger 1. (517 aa)    
Predicted Functional Partners:
ARIH1
RBR-type E3 ubiquitin transferase.
   
 
 0.699
USF2
Upstream transcription factor 2, c-fos interacting.
   
 0.658
USP19
Ubiquitin specific peptidase 19.
   
 0.649
CCNB1IP1
Cyclin B1 interacting protein 1.
    
 
 0.628
USF1
Upstream transcription factor 1.
   
 0.589
PABPN1
Poly(A) binding protein nuclear 1.
    
 
 0.573
PAGR1
PAXIP1 associated glutamate rich protein 1.
   
 
 0.517
KCTD13
Potassium channel tetramerization domain containing 13.
    
 
 0.479
USP4
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 
 0.472
BRAP
BRCA1 associated protein.
    
 
 0.469
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.