STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM11Tripartite motif containing 11. (507 aa)    
Predicted Functional Partners:
TRIM44
Tripartite motif containing 44.
    
 
 0.895
TRIM66
Tripartite motif containing 66.
   
  
 0.832
LOC111769716
Tripartite motif containing 23.
    
 0.686
TRIM23
Tripartite motif containing 23.
    
 0.686
LOC111772291
Uncharacterized protein.
    
 0.686
TRIM28
Tripartite motif containing 28.
   
 
 0.668
DNAL1
Dynein axonemal light chain 1.
   
 
 0.635
TRIM37
Tripartite motif containing 37.
    
 
 0.608
TRIM33
Tripartite motif containing 33.
    
 
 0.594
IGFBP3
Insulin like growth factor binding protein 3.
      
 0.563
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.