STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB33ARAB33A, member RAS oncogene family. (268 aa)    
Predicted Functional Partners:
RAB33B
RAB33B, member RAS oncogene family.
  
 
0.917
TBC1D25
TBC1 domain family member 25.
     
 0.891
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.833
RUFY2
RUN and FYVE domain containing 2.
    
 
 0.793
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.741
TRAPPC4
Trafficking protein particle complex 4.
    
 0.730
TRAPPC8
Trafficking protein particle complex 8.
    
 0.730
MGAT5B
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.
    
 0.727
TBC1D20
TBC1 domain family member 20.
    
 0.722
TRAPPC2
Trafficking protein particle complex 2.
    
 0.721
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.