STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MINDY4MINDY lysine 48 deubiquitinase 4. (816 aa)    
Predicted Functional Partners:
CDC42BPA
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
      
 0.644
TOX2
TOX high mobility group box family member 2.
   
  
 0.638
SPECC1L
Calponin-homology (CH) domain-containing protein.
      
 0.633
KCTD18
Potassium channel tetramerization domain containing 18.
   
  
 0.614
TTC22
Tetratricopeptide repeat domain 22.
      
 0.598
GIT2
GIT ArfGAP 2.
      
 0.589
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
    
 
 0.581
LRBA
LPS responsive beige-like anchor protein.
      
 0.574
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.553
C2CD2
C2 calcium dependent domain containing 2.
      
 0.544
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.