STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMED5Transmembrane p24 trafficking protein 5. (229 aa)    
Predicted Functional Partners:
PIGC
Phosphatidylinosito N-acetylglucosaminyltransferase subunit C-like protein.
 
    
 0.785
SYPL1
Synaptophysin like 1.
   
  
 0.762
TUBGCP2
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.742
MYSM1
Myb like, SWIRM and MPN domains 1.
   
  
 0.711
C1D
C1D nuclear receptor corepressor.
   
  
 0.710
TMED10
Transmembrane p24 trafficking protein 10.
   
 
 0.681
EEF1AKNMT
EEF1A lysine and N-terminal methyltransferase.
      
 0.678
TMED2
Transmembrane p24 trafficking protein 2.
   
 
0.654
ORC5
Origin recognition complex subunit 5.
      
 0.650
SENP5
SUMO specific peptidase 5.
      
 0.642
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.