STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAXBP1PAX3 and PAX7 binding protein 1. (918 aa)    
Predicted Functional Partners:
DUS2
Dihydrouridine synthase 2.
      
 0.821
COPRS
Coordinator of PRMT5 and differentiation stimulator.
      
 0.772
TMC4
Transmembrane channel-like protein.
      
 0.738
COMTD1
Catechol-O-methyltransferase domain containing 1.
   
  
 0.725
MAP6D1
MAP6 domain containing 1.
      
 0.721
SYNJ1
Synaptojanin 1.
 
    
 0.696
TBC1D14
TBC1 domain family member 14.
      
 0.696
CAMK1G
Calcium/calmodulin dependent protein kinase IG; Belongs to the protein kinase superfamily.
      
 0.639
FTSJ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
    0.632
DHX15
DEAH-box helicase 15.
   
 0.630
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.