STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPN23Protein tyrosine phosphatase non-receptor type 23. (1639 aa)    
Predicted Functional Partners:
UBAP1
Ubiquitin associated protein 1.
    
 0.878
STAM2
Signal transducing adaptor molecule 2.
   
 0.876
GRAP2
GRB2 related adaptor protein 2.
   
 0.844
DHX30
DExH-box helicase 30.
   
 0.832
TM9SF1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.819
CHMP4B
Charged multivesicular body protein 4B.
   
 0.818
CHMP4C
Charged multivesicular body protein 4C.
   
 0.816
ENSECAP00000026548
Uncharacterized protein.
   
 0.816
LARS2
Leucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.812
ZFYVE16
Zinc finger FYVE-type containing 16.
   
 
 0.793
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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