STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPEB1Uncharacterized protein. (561 aa)    
Predicted Functional Partners:
AURKA
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.924
PLK1
Serine/threonine-protein kinase PLK.
   
 0.923
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.920
SYMPK
Symplekin.
    
 
 0.875
WDR86
WD repeat domain 86.
   
 
 0.692
TENT2
Terminal nucleotidyltransferase 2.
   
 
 0.686
FXR2
FMR1 autosomal homolog 2.
    
 
 0.676
SERTAD2
SERTA domain containing 2.
      
 0.655
AHSA2
Aha1_N domain-containing protein.
      
 0.651
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.651
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.