STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC9BCoiled-coil domain containing 9B. (570 aa)    
Predicted Functional Partners:
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.558
DCTN5
Dynactin subunit 5-like protein.
    
 0.508
ZNF276
Zinc finger protein 276.
   
 0.489
PDCD1
Programmed cell death 1.
  
 
  0.485
TARBP1
TAR (HIV-1) RNA binding protein 1.
   
  
 0.485
TOMM6
Translocase of outer mitochondrial membrane 6.
      
 0.477
LEPROT
Leptin receptor overlapping transcript.
   
  
 0.477
PLCB2
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
      
 0.477
ITGB3BP
Integrin subunit beta 3 binding protein.
  
 
  0.475
UACA
Uveal autoantigen with coiled-coil domains and ankyrin repeats.
    
 0.470
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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