STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCF3ATP binding cassette subfamily F member 3. (709 aa)    
Predicted Functional Partners:
GCN1
GCN1 activator of EIF2AK4.
   
 
 0.996
ABCD4
ATP binding cassette subfamily D member 4.
      
 0.845
ABCA10
ATP binding cassette subfamily A member 10.
    
 
 0.838
ABCB9
ATP binding cassette subfamily B member 9.
  
 
 0.830
ABCC6
ATP binding cassette subfamily C member 6.
  
 
 0.794
ABCC5
ATP binding cassette subfamily C member 5.
  
 
 0.774
ABCA5
ATP binding cassette subfamily A member 5.
    
 
 0.762
ABCB7
ATP binding cassette subfamily B member 7.
      
 0.750
EIF2S1
Eukaryotic translation initiation factor subunit 1-like protein.
   
 0.740
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.738
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.