STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF21TNF receptor superfamily member 21. (659 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 
 0.810
TMEM14A
Transmembrane protein 14A.
      
 0.677
UBASH3A
Ubiquitin associated and SH3 domain containing A.
   
  
 0.635
RNFT2
Ring finger protein, transmembrane 2.
      
 0.634
LAPTM4A
Lysosomal-associated transmembrane protein 4-like protein.
      
 0.632
LOC111767432
BPTI/Kunitz inhibitor domain-containing protein.
    
 
 0.630
RAPGEFL1
Rap guanine nucleotide exchange factor like 1.
   
  
 0.590
FAM118A
Family with sequence similarity 118 member A.
      
 0.562
TNFRSF8
TNF receptor superfamily member 8.
   
  
 0.536
APLP1
Amyloid beta precursor like protein 1.
    
 
 0.531
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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