STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC84Coiled-coil domain containing 84. (351 aa)    
Predicted Functional Partners:
ENTR1
Endosome associated trafficking regulator 1.
   
  
 0.915
CCP110
Centriolar coiled-coil protein 110.
   
  
 0.815
SEPTIN8
Septin 8; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
   
  
 0.755
SGCE
Sarcoglycan epsilon.
      
 0.714
NOVA2
NOVA alternative splicing regulator 2.
      
 0.692
MAP7D1
MAP7 domain containing 1.
   
  
 0.675
MRGBP
MRG domain binding protein.
   
  
 0.674
TMEM208
Transmembrane protein 208.
      
 0.663
TOR1A
Torsin family 1 member A.
      
 0.662
KCNMA1
Potassium calcium-activated channel subfamily M alpha 1.
      
 0.650
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.