STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT4Synaptotagmin 4. (577 aa)    
Predicted Functional Partners:
RIT2
Ras like without CAAX 2.
   
  
 0.714
VAMP2
V-SNARE coiled-coil homology domain-containing protein.
   
 0.710
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.698
VAMP3
Vesicle associated membrane protein 3.
   
 0.694
SYT1
Synaptotagmin 1.
   
0.676
SYT2
Synaptotagmin 2.
   
0.671
NXPH3
Neurexophilin; May be signaling molecules that resemble neuropeptides.
      
 0.671
STON2
Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.
   
 0.660
VAMP1
Vesicle associated membrane protein 1.
   
 0.654
RAB3A
RAB3A, member RAS oncogene family.
   
 0.647
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.