STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZRANB1Zinc finger RANBP2-type containing 1. (734 aa)    
Predicted Functional Partners:
APC
APC regulator of WNT signaling pathway.
   
  0.913
OTUD3
OTU deubiquitinase 3.
   
  
 0.836
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.831
USP50
Ubiquitin specific peptidase 50; Belongs to the peptidase C19 family.
      
 0.798
MYSM1
Myb like, SWIRM and MPN domains 1.
   
  
 0.781
USP13
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.776
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.724
USP7
Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family.
   
 
 0.708
RPS27A
Ribosomal protein S27a.
   
 0.678
ENSECAP00000044533
Ubiquitin-like domain-containing protein.
   
 0.678
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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