Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APC | RPS27A | ENSECAP00000037249 | ENSECAP00000016396 | APC regulator of WNT signaling pathway. | Ribosomal protein S27a. | 0.430 |
APC | ZRANB1 | ENSECAP00000037249 | ENSECAP00000015318 | APC regulator of WNT signaling pathway. | Zinc finger RANBP2-type containing 1. | 0.913 |
ENSECAP00000044533 | MYSM1 | ENSECAP00000044533 | ENSECAP00000034539 | Ubiquitin-like domain-containing protein. | Myb like, SWIRM and MPN domains 1. | 0.958 |
ENSECAP00000044533 | OTUD3 | ENSECAP00000044533 | ENSECAP00000017261 | Ubiquitin-like domain-containing protein. | OTU deubiquitinase 3. | 0.430 |
ENSECAP00000044533 | TRAF6 | ENSECAP00000044533 | ENSECAP00000018618 | Ubiquitin-like domain-containing protein. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.885 |
ENSECAP00000044533 | UBA52 | ENSECAP00000044533 | ENSECAP00000018080 | Ubiquitin-like domain-containing protein. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.983 |
ENSECAP00000044533 | USP13 | ENSECAP00000044533 | ENSECAP00000004375 | Ubiquitin-like domain-containing protein. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.729 |
ENSECAP00000044533 | USP7 | ENSECAP00000044533 | ENSECAP00000036227 | Ubiquitin-like domain-containing protein. | Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family. | 0.881 |
ENSECAP00000044533 | ZRANB1 | ENSECAP00000044533 | ENSECAP00000015318 | Ubiquitin-like domain-containing protein. | Zinc finger RANBP2-type containing 1. | 0.678 |
MYSM1 | ENSECAP00000044533 | ENSECAP00000034539 | ENSECAP00000044533 | Myb like, SWIRM and MPN domains 1. | Ubiquitin-like domain-containing protein. | 0.958 |
MYSM1 | OTUD3 | ENSECAP00000034539 | ENSECAP00000017261 | Myb like, SWIRM and MPN domains 1. | OTU deubiquitinase 3. | 0.463 |
MYSM1 | RPS27A | ENSECAP00000034539 | ENSECAP00000016396 | Myb like, SWIRM and MPN domains 1. | Ribosomal protein S27a. | 0.958 |
MYSM1 | UBA52 | ENSECAP00000034539 | ENSECAP00000018080 | Myb like, SWIRM and MPN domains 1. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.960 |
MYSM1 | USP13 | ENSECAP00000034539 | ENSECAP00000004375 | Myb like, SWIRM and MPN domains 1. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.745 |
MYSM1 | USP50 | ENSECAP00000034539 | ENSECAP00000021152 | Myb like, SWIRM and MPN domains 1. | Ubiquitin specific peptidase 50; Belongs to the peptidase C19 family. | 0.825 |
MYSM1 | USP7 | ENSECAP00000034539 | ENSECAP00000036227 | Myb like, SWIRM and MPN domains 1. | Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family. | 0.583 |
MYSM1 | ZRANB1 | ENSECAP00000034539 | ENSECAP00000015318 | Myb like, SWIRM and MPN domains 1. | Zinc finger RANBP2-type containing 1. | 0.781 |
OTUD3 | ENSECAP00000044533 | ENSECAP00000017261 | ENSECAP00000044533 | OTU deubiquitinase 3. | Ubiquitin-like domain-containing protein. | 0.430 |
OTUD3 | MYSM1 | ENSECAP00000017261 | ENSECAP00000034539 | OTU deubiquitinase 3. | Myb like, SWIRM and MPN domains 1. | 0.463 |
OTUD3 | RPS27A | ENSECAP00000017261 | ENSECAP00000016396 | OTU deubiquitinase 3. | Ribosomal protein S27a. | 0.430 |
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