STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEZ6Seizure related 6 homolog. (994 aa)    
Predicted Functional Partners:
GALNT18
Polypeptide N-acetylgalactosaminyltransferase.
   
 0.765
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.716
PHF12
PHD finger protein 12.
 
  
 
 0.709
SDF2
Stromal cell derived factor 2.
    
 
 0.706
ATRN
Attractin.
    
 
 0.655
CNTNAP4
Contactin associated protein like 4.
      
 0.651
CRIM1
Cysteine rich transmembrane BMP regulator 1.
   
 0.646
APLP1
Amyloid beta precursor like protein 1.
   
 0.624
XAF1
XIAP associated factor 1.
    
 0.600
CNTN2
Contactin 2.
   
 0.589
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.