STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOR3ATorsin family 3 member A. (405 aa)    
Predicted Functional Partners:
EPDR1
Ependymin related 1.
   
  
 0.772
TOR1AIP1
Torsin 1A interacting protein 1.
   
 
 0.757
RFT1
Protein RFT1 homolog; May be involved in N-linked oligosaccharide assembly. Belongs to the RFT1 family.
   
  
 0.705
MRPS18A
Mitochondrial ribosomal protein S18A.
      
 0.703
SPAG4
Sperm associated antigen 4.
   
  
 0.697
AHCTF1
AT-hook containing transcription factor 1.
      
 0.691
TRIM65
Tripartite motif containing 65.
   
  
 0.683
OLFML2B
Olfactomedin like 2B.
      
 0.679
MMP11
Matrix metallopeptidase 11.
      
 0.591
CEP350
Centrosomal protein 350.
      
 0.576
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.