STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM241BFamily with sequence similarity 241 member B. (120 aa)    
Predicted Functional Partners:
MAPRE3
Uncharacterized protein.
      
 0.770
PDZD8
PDZ domain containing 8.
      
 0.715
DLX6
Distal-less homeobox 6.
      
 0.636
LHFPL4
LHFPL tetraspan subfamily member 4.
      
 0.634
NSD3
Nuclear receptor binding SET domain protein 3.
      
 0.633
IGSF9B
Immunoglobulin superfamily member 9B.
   
  
 0.562
NFIA
Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.
      
 0.519
CNOT4
CCR4-NOT transcription complex subunit 4.
      
 0.518
TMEM92
Transmembrane protein 92.
   
    0.499
PAX2
Paired box 2.
      
 0.471
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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