STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C20orf194Chromosome 20 open reading frame 194. (1177 aa)    
Predicted Functional Partners:
TTBK1
Tau tubulin kinase 1.
   
  
 0.794
VPS26A
VPS26, retromer complex component A.
      
 0.770
VPS26A-2
Uncharacterized protein.
      
 0.770
DNHD1
Dynein heavy chain domain 1.
    
 
 0.661
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
      
 0.651
CAPRIN2
Caprin family member 2.
      
 0.646
DNAL4
Dynein light chain.
    
 
 0.631
DYNLT1
Dynein light chain Tctex-type 1.
    
 
 0.628
DYNLT3
Dynein light chain Tctex-type 3.
    
 
 0.615
DYNLL2
Uncharacterized protein.
    
 
 0.609
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.