STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPLLHeterogeneous nuclear ribonucleoprotein L like. (538 aa)    
Predicted Functional Partners:
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 
 0.818
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.808
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.803
HNRNPC
RRM domain-containing protein.
   
 0.779
PCBP2
Poly(rC) binding protein 2.
   
 0.774
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
   
   0.773
SETD2
SET domain containing 2, histone lysine methyltransferase.
    
 
 0.762
HNRNPF
Heterogeneous nuclear ribonucleoprotein F.
   
 0.740
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.718
SRSF2
RRM domain-containing protein.
   
 0.716
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.