STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM35Tripartite motif containing 35. (493 aa)    
Predicted Functional Partners:
TRIM44
Tripartite motif containing 44.
   
 
 0.838
TRIM32
Tripartite motif containing 32.
    
 0.767
TRIM66
Tripartite motif containing 66.
   
  
 0.762
TRIM45
Tripartite motif containing 45.
     
 0.720
TRIM55
Tripartite motif containing 55.
   
 
 0.649
RNF111
Ring finger protein 111.
   
 
 0.577
TRIM3
ADP ribosylation factor interacting protein 2.
      
0.564
RAB32
RAB32, member RAS oncogene family.
      
 0.561
PKP2
Plakophilin 2.
    
 
 0.561
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
   
 0.549
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.