STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATS2LSpermatogenesis associated serine rich 2 like. (589 aa)    
Predicted Functional Partners:
PARM1
Prostate androgen-regulated mucin-like protein 1.
      
 0.695
AKNAD1
AKNA domain containing 1.
      
 0.695
TTC22
Tetratricopeptide repeat domain 22.
      
 0.648
CSDC2
Cold shock domain containing C2.
   
 
 0.643
VPS35L
VPS35 endosomal protein sorting factor like.
      
 0.581
KCTD18
Potassium channel tetramerization domain containing 18.
   
  
 0.567
GTF3A
General transcription factor IIIA.
   
  
 0.563
MINDY4
MINDY lysine 48 deubiquitinase 4.
      
 0.553
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
      
 0.548
MAN2C1
Mannosidase alpha class 2C member 1.
      
 0.543
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.