STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM218Transmembrane protein 218. (115 aa)    
Predicted Functional Partners:
MFRP
Membrane frizzled-related protein.
      
 0.853
LRRC10B
Leucine rich repeat containing 10B.
      
 0.800
CRYM
Crystallin mu.
      
 0.711
SCARA3
Scavenger receptor class A member 3.
      
 0.695
WBP1
WW domain binding protein 1.
      
 0.600
OGFOD2
2-oxoglutarate and iron dependent oxygenase domain containing 2.
      
 0.599
F7C0X6_HORSE
RING-type domain-containing protein.
      
 0.538
KIF9
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.486
KIAA1191
KIAA1191.
      
 0.476
ITGA9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
      
 0.473
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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