STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TENT5BTerminal nucleotidyltransferase 5B. (427 aa)    
Predicted Functional Partners:
TENT4A
Terminal nucleotidyltransferase 4A.
      
 0.775
PAPOLG
Poly(A) polymerase gamma.
      
 0.549
EFCAB11
EF-hand calcium binding domain 11.
   
  
 0.528
PLK4
Polo like kinase 4.
    
 
 0.486
LOC100065112
Protein kinase domain-containing protein.
   
  
 0.484
RBM43
RNA binding motif protein 43.
      
 0.477
TSSK3
Testis specific serine kinase 3.
   
  
 0.477
FAM117B
Family with sequence similarity 117 member B.
      
 0.476
MTPAP
Mitochondrial poly(A) polymerase.
      
 0.471
FAM43A
Family with sequence similarity 43 member A.
      
 0.471
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.