STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYPD4LY6/PLAUR domain containing 4. (246 aa)    
Predicted Functional Partners:
PGAP1
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins. GPI inositol deacylation may important for efficient transport of GPI- anchored proteins from the endoplasmic reticulum to the Golgi.
      
 0.777
SPACA1
Sperm acrosome associated 1.
   
  
 0.696
C1H10orf120
Chromosome 1 C10orf120 homolog.
   
  
 0.680
SAXO1
Stabilizer of axonemal microtubules 1.
   
 
 0.676
C5orf47
Chromosome 5 open reading frame 47.
   
  
 0.675
ENSECAP00000043921
UPAR/Ly6 domain-containing protein.
      
 0.623
GP2
Glycoprotein 2.
   
 
 0.596
CCDC27
Coiled-coil domain containing 27.
      
 0.581
TRIM42
Tripartite motif containing 42.
   
  
 0.569
SPACA4
Sperm acrosome associated 4.
   
  
 0.553
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.