STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABPAGA binding protein transcription factor subunit alpha. (454 aa)    
Predicted Functional Partners:
GABPB1
GA binding protein transcription factor subunit beta 1.
   
 0.993
GABPB2
GA binding protein transcription factor subunit beta 2.
   
 0.877
METTL23
Methyltransferase like 23.
      
 0.701
SCNM1
Sodium channel modifier 1.
   
  
 0.672
LCOR
Ligand dependent nuclear receptor corepressor.
   
 
 0.668
ZNF213
Zinc finger protein 213.
    
 
 0.608
TFAM
Transcription factor A, mitochondrial.
   
 
 0.605
DNAJC21
DnaJ heat shock protein family (Hsp40) member C21.
      
 0.593
ZNF143
Zinc finger protein 143.
   
 
 0.581
ATP5PF
ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.
      
 0.562
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.