STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELAVL1ELAV-like protein; Belongs to the RRM elav family. (326 aa)    
Predicted Functional Partners:
PRKCD
Protein kinase C delta type; Calcium-independent, phospholipid- and diacylglycerol (DAG)- dependent serine/threonine-protein kinase that plays contrasting roles in cell death and cell survival by functioning as a pro-apoptotic protein during DNA damage-induced apoptosis, but acting as an anti- apoptotic protein during cytokine receptor-initiated cell death, is involved in tumor suppression; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 0.924
CCNA1
Cyclin A1; Belongs to the cyclin family.
   
 
 0.920
CCND1
Cyclin D1; Belongs to the cyclin family.
     
 0.915
PRKAA1
Non-specific serine/threonine protein kinase.
   
 
 0.907
PRKAA2
Non-specific serine/threonine protein kinase.
     
 0.906
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
   
 0.905
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
   
 0.902
PRKAG3
Protein kinase AMP-activated non-catalytic subunit gamma 3.
   
 
 0.901
PRKAG1
Protein kinase AMP-activated non-catalytic subunit gamma 1.
     
  0.900
PRKAG2
Protein kinase AMP-activated non-catalytic subunit gamma 2.
   
 
  0.900
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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