STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE2Copine 2. (548 aa)    
Predicted Functional Partners:
RAD1
RAD1 checkpoint DNA exonuclease.
   
  
 0.767
MOB3C
MOB kinase activator 3C.
      
 0.558
DHX33
DEAH-box helicase 33.
      
 0.556
RNASEH2B
Ribonuclease H2 subunit B.
   
 
 0.502
NAA20
N(alpha)-acetyltransferase 20, NatB catalytic subunit.
      
 0.491
SLC22A16
Solute carrier family 22 member 16.
      
 0.487
DPH5
Diphthamide biosynthesis 5.
      
 0.487
GNA15
G protein subunit alpha 15.
      
 0.487
SDSL
Serine dehydratase like.
      
 0.482
TCN1
Transcobalamin 1.
      
 0.477
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.