STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVL9AVL9 cell migration associated. (649 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
   
  
 0.920
DENND11
KIAA1147.
      
 0.839
RAB30
Ras-related protein Rab-30-like protein.
      
 0.831
DENND10
DENN domain containing 10.
      
 0.830
RAB33B
RAB33B, member RAS oncogene family.
      
 0.772
RAB33A
RAB33A, member RAS oncogene family.
      
 0.697
DENND4C
DENN domain containing 4C.
   
  
 0.624
RAB18
RAB18, member RAS oncogene family.
   
  
 0.591
RAB35
RAB35, member RAS oncogene family.
   
  
 0.581
DENND4A
DENN domain containing 4A.
   
  
 0.577
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.