STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNMDChondromodulin. (334 aa)    
Predicted Functional Partners:
EPYC
Epiphycan.
   
 
 0.700
UCMA
Upper zone of growth plate and cartilage matrix associated.
   
  
 0.674
HAPLN1
Hyaluronan and proteoglycan link protein 1; Stabilizes the aggregates of proteoglycan monomers with hyaluronic acid in the extracellular cartilage matrix; Belongs to the HAPLN family.
   
 0.673
MATN3
Matrilin 3.
   
 0.601
COL9A1
Collagen type IX alpha 1 chain.
   
 0.585
MATN4
Matrilin 4.
   
 0.563
SCRG1
Stimulator of chondrogenesis 1.
   
  
 0.519
CLEC3A
C-type lectin domain family 3 member A.
   
 0.500
ACP5
Tartrate-resistant acid phosphatase type 5.
      
 0.497
PSAPL1
Proactivator polypeptide-like 1; May activate the lysosomal degradation of sphingolipids.
      
 0.487
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.