STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111772091Uncharacterized protein. (466 aa)    
Predicted Functional Partners:
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.604
TNNT3
Troponin T3, fast skeletal type.
   
 0.604
TNNT2
Troponin T2, cardiac type.
   
 0.604
TNNT1
Troponin T1, slow skeletal type.
   
 0.604
SMIM20
Small integral membrane protein 20.
   
 0.604
SH3RF3
SH3 domain containing ring finger 3.
   
  0.523
KXD1
KxDL motif containing 1.
   
   0.518
TNNI2
Troponin I2, fast skeletal type.
   
 0.494
TNNI1
Troponin I1, slow skeletal type.
   
 0.494
CALD1
Caldesmon 1.
   
 0.494
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.