STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100072895Beta-galactosidase. (648 aa)    
Predicted Functional Partners:
NEU1
Neuraminidase 1.
  
 0.566
CTSA
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.548
RPL8
Ribosomal protein L8.
   
  
 0.493
CPVL
Carboxypeptidase vitellogenic like; Belongs to the peptidase S10 family.
   
 0.483
RIBC1
RIB43A domain with coiled-coils 1.
      
 0.478
CAPN7
Calpain 7; Belongs to the peptidase C2 family.
   
  
 0.442
DECR1
2,4-dienoyl-CoA reductase 1.
   
 
 0.436
NCAPD3
Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis.
      
 0.432
NAGA
Alpha-galactosidase.
  
 
 0.421
GLA
Alpha-galactosidase.
  
 
 0.420
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.