STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID5BAT-rich interaction domain 5B. (1109 aa)    
Predicted Functional Partners:
PHF2
PHD finger protein 2.
   
 
 0.955
LOC106782954
Chromosome 3 C16orf87 homolog.
    
 
 0.677
CUL7
Cullin 7; Belongs to the cullin family.
   
  
 0.676
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
  
 0.635
KDM3B
Lysine demethylase 3B.
   
 
 0.626
ZFAND5
Zinc finger AN1-type containing 5.
   
  
 0.586
ABCC6
ATP binding cassette subfamily C member 6.
   
  
 0.583
CCDC174
Coiled-coil domain containing 174.
   
  
 0.570
JMJD1C
Jumonji domain containing 1C.
   
 
 0.569
IRX5
Iroquois homeobox 5.
    
 
 0.561
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.