STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSC4DScavenger receptor cysteine rich family member with 4 domains. (586 aa)    
Predicted Functional Partners:
LOC100055297
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
 
 
  0.574
FBXO21
F-box protein 21.
   
  
 0.573
LOC100049983
Uncharacterized protein; Belongs to the peptidase S1 family.
 
 
  0.568
PRSS33
Serine protease 33; Belongs to the peptidase S1 family.
 
 
  0.532
FBLN1
Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.
    
 0.519
PTPRA
Receptor-type tyrosine-protein phosphatase alpha.
   
 0.496
NFATC2IP
Nuclear factor of activated T cells 2 interacting protein.
   
 0.489
FAM222B
Family with sequence similarity 222 member B.
   
  
 0.485
PLAU
Plasminogen activator, urokinase.
 
 
 0.484
ZNF789
Zinc finger protein 789.
     
 0.483
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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