STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNICyclin I; Belongs to the cyclin family. (377 aa)    
Predicted Functional Partners:
NUDC
Nuclear distribution C, dynein complex regulator.
   
 
 0.721
CDK5
Cyclin dependent kinase 5; Belongs to the protein kinase superfamily.
   
 
 0.711
OCIAD2
OCIA domain containing 2.
      
 0.698
CCNH
Cyclin H; Belongs to the cyclin family.
    
 0.697
CHPT1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
  
 0.656
FZR1
Fizzy and cell division cycle 20 related 1.
   
 0.621
CDC20B
Cell division cycle 20B.
   
 0.619
CDC20
Cell division cycle 20.
   
 0.619
INTU
Inturned planar cell polarity protein.
   
 0.619
CDC27
Cell division cycle 27.
   
 0.593
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.