TRIO protein (Equus caballus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TRIO

Trio Rho guanine nucleotide exchange factor. (3107 aa)

Predicted Functional Partners:

GALP

0.632

RHOBTB2

0.629

RHOBTB1

0.629

RAC1

0.625

RAC3

0.622

ENSECAP00000041955

0.622

RND1

0.617

RND3

0.617

RHOG

0.617

F6THK5_HORSE

0.616

Your Current Organism:

Equus caballus

NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSECAP00000041955	F6THK5_HORSE	ENSECAP00000041955	ENSECAP00000001614	Uncharacterized protein.	Uncharacterized protein.	0.426
ENSECAP00000041955	RHOG	ENSECAP00000041955	ENSECAP00000020368	Uncharacterized protein.	Ras homolog family member G.	0.425
ENSECAP00000041955	RND1	ENSECAP00000041955	ENSECAP00000018486	Uncharacterized protein.	Rho family GTPase 1.	0.637
ENSECAP00000041955	RND3	ENSECAP00000041955	ENSECAP00000018838	Uncharacterized protein.	Rho family GTPase 3.	0.502
ENSECAP00000041955	TRIO	ENSECAP00000041955	ENSECAP00000017858	Uncharacterized protein.	Trio Rho guanine nucleotide exchange factor.	0.622
F6THK5_HORSE	ENSECAP00000041955	ENSECAP00000001614	ENSECAP00000041955	Uncharacterized protein.	Uncharacterized protein.	0.426
F6THK5_HORSE	RAC1	ENSECAP00000001614	ENSECAP00000035360	Uncharacterized protein.	Rac family small GTPase 1.	0.421
F6THK5_HORSE	RAC3	ENSECAP00000001614	ENSECAP00000011876	Uncharacterized protein.	Rac family small GTPase 3.	0.419
F6THK5_HORSE	RHOG	ENSECAP00000001614	ENSECAP00000020368	Uncharacterized protein.	Ras homolog family member G.	0.901
F6THK5_HORSE	RND1	ENSECAP00000001614	ENSECAP00000018486	Uncharacterized protein.	Rho family GTPase 1.	0.453
F6THK5_HORSE	RND3	ENSECAP00000001614	ENSECAP00000018838	Uncharacterized protein.	Rho family GTPase 3.	0.447
F6THK5_HORSE	TRIO	ENSECAP00000001614	ENSECAP00000017858	Uncharacterized protein.	Trio Rho guanine nucleotide exchange factor.	0.616
GALP	TRIO	ENSECAP00000024533	ENSECAP00000017858	Galanin like peptide.	Trio Rho guanine nucleotide exchange factor.	0.632
RAC1	F6THK5_HORSE	ENSECAP00000035360	ENSECAP00000001614	Rac family small GTPase 1.	Uncharacterized protein.	0.421
RAC1	RHOG	ENSECAP00000035360	ENSECAP00000020368	Rac family small GTPase 1.	Ras homolog family member G.	0.439
RAC1	RND1	ENSECAP00000035360	ENSECAP00000018486	Rac family small GTPase 1.	Rho family GTPase 1.	0.630
RAC1	RND3	ENSECAP00000035360	ENSECAP00000018838	Rac family small GTPase 1.	Rho family GTPase 3.	0.495
RAC1	TRIO	ENSECAP00000035360	ENSECAP00000017858	Rac family small GTPase 1.	Trio Rho guanine nucleotide exchange factor.	0.625
RAC3	F6THK5_HORSE	ENSECAP00000011876	ENSECAP00000001614	Rac family small GTPase 3.	Uncharacterized protein.	0.419
RAC3	RHOG	ENSECAP00000011876	ENSECAP00000020368	Rac family small GTPase 3.	Ras homolog family member G.	0.432